South Africa and the Cradle of Sauropod-Kind

Artist's reconstruction of Pulanesaura by Gina Viglietti.

Artist’s reconstruction of Pulanesaura by Gina Viglietti.

I am happy to report on a new sauropod dinosaur from the Early Jurassic of South Africa! The dinosaur, Pulanesaura, was discovered in 2004 and has been a long time coming to press. Now, she’s finally here.

When I was maybe four or five years old, I remember reading a dinosaur book with my mother. The book described for children how dinosaurs were discovered and excavated in the field, and then how the bones were reassembled back in the lab. What I don’t remember, but I have been told, was that at some point during the explanation of how dinosaurs were unearthed, I interjected, “And then they have lunch.”

I was five years old in 1978. Fast-forward to the fall of 2004, and my 31-year-old self is standing in the rain at Spion Kop farm in the Free State of South Africa marveling at the large limb bones poking out of a section of the upper Elliot Formation. I don’t recall having lunch at that moment, but I do remember being excited, and being grateful that I was part of a team, headed by Adam Yates, charged with exploring these Early Jurassic rocks. National Geographic had sponsored our grant to pursue promising bones issuing forth from these rocks, and although we did not immediately know we had a new dinosaur, there was a good possibility we did.

Matt w tibia (1)

Myself above two tibia bones (tibiae) from what would become known as Pulanesaura in 2004 … it was a less rainy day that day.

Why South Africa? As it turns out, South Africa has many exposures of Lower Jurassic rocks that record a very significant time in dinosaur evolution. The earliest true dinosaurs appeared in the Triassic period about 235 million years ago (Ma) but remained relatively small to medium-sized animals that were in competition with other vertebrate groups vying for dominance in a harsh world. During the Triassic period, all the continents were amalgamated into a single supercontinent dubbed Pangea. Although to a modern traveler the thought of Pangea sounds amazing (imagine riding a train from North America over to Europe or driving from South America into Antarctica, Africa, or Australia), ecologically this was disastrous. A huge expanse of Pangea was landlocked and nearly devoid of water, making it both hot and uninhabitable. Moreover, sea levels were also drastically lower, creating fewer areas for marine life to thrive. Thus, Pangea took a huge toll on the animals that preceded the dinosaurs. In fact, the largest mass extinction in the past 540 million years occurred just prior to the Triassic period, wiping out a majority of life on the planet.

During the Early Jurassic (starting about 200 Ma), Pangea began to unzip and break up into separate landmasses, and part of the effect of this was to bring water into regions it hadn’t been in millions of years, supporting more plants and, in turn, the animals that fed on them. It is also at this critical juncture that the sauropodomorph dinosaurs began to become larger-bodied and more diverse so that by the end of the Jurassic period (about 145 Ma), many of these herbivores were tipping the scales at 20-30 metric tons! Sauropodomorphs started out as small to medium-sized bipedal herbivores that used their long necks and grasping hands to consume foliage at different heights in their environment. Sauropods became fully quadrupedal giants with elongate necks that acted as efficient food-gathering feeding booms, sweeping across swaths of vegetation while the herbivore stayed put. And this transition from mostly bipedal herbivores eating with their hands and necks to giant quadrupeds that relied solely on long necks to feed occurred right around the Early Jurassic period about 200 Ma. So, if you want to understand the beginnings of this trend towards gigantism in the sauropodomorph dinosaurs, you need to search for fossils in Early Jurassic rocks … and that brings us back to me standing in the rain at Spion Kop on the upper Elliot Formation staring at the large bones coming out of the ground.

Those bones we were unearthing would end up being a sauropod new to science named Pulanesaura that my colleagues and I have published on this week in Nature Scientific Reports. The lead author, Blair McPhee, is a Ph.D. student at the University of Witwatersrand in South Africa who took on this dinosaur for his dissertation. Remember that we discovered Pulanesaura in 2004?  Why didn’t we publish on this animal earlier? For a number of reasons collectively called life. Between 2009 and 2011, we did publish on two other sauropodomorph dinosaurs from Spion Kop, so that took up some time. But more significantly, Adam Yates and I had major life-changing moves to new employers: Adam to the Museum of Central Australia in Alice Springs; me to Stockton University. And so poor Pulanesaura was languishing. Therefore, when Blair approached us about describing Pulanesaura for his Ph.D., we were enthusiastically supportive. I was especially pleased to see Blair at the helm of the description. I am beyond happy that a South African Ph.D. student is the lead author on the description of a native South African dinosaur. His persistence and perseverance on this project is why the world now knows about Pulanesaura.

Why Pulanesaura? Well, the name means “rain bringer” in Sesotho, which is fitting since we always seemed to get rained on during the excavation of this dinosaur. And the publication of “Rain Bringer” has finally brought home a trilogy of sauropodomorph dinosaurs and the complex story they tell of what was happening in the Early Jurassic at what is now the Spion Kop farm.

First things first – how do we know Pulanesaura is a sauropod? A number of clues point the way. For one thing, although we did not find a skull, we found teeth. The teeth of sauropods, unlike their sauropodomorph brethren, have a spoon- or spatula-like profile and have wrinkled enamel. The teeth of Pulanesaura certainly fit the bill there.

Next, being large, sauropods braced their vertebral column with extra joints in their backbones (vertebrae) – a portion of this extra joint is called the hyposphene. The body vertebrae we have of Pulanesaura only preserve their tops (the hyposphene is located on the bottom-half of the vertebra) but luckily a full tail (caudal) vertebra is preserved, and that has a hyposphene. We are also fortunate that part of the forelimb was preserved. The ulna bone in sauropods cradles the other forearm bone, the radius, by wrapping around it from behind. In sauropods, a wide, triangular depression is present on the ulna where the radius sits. Although the ulna of Pulanesaura is a bit crushed and scrappy, it was intact enough to show that, yes, indeed, such a depression for the radius was there. These features and more showed us that this dinosaur was certainly a true sauropod.

How do we know Pulanesaura is new to science? Using a method called cladistics, the suite of features for Pulanesaura was compared to other sauropodomorphs and sauropods from South Africa and around the globe. Its unique combination of features show that it is not a member of previously known sauropodomorph or sauropod dinosaurs, but falls along its own branch of the dinosaur family tree near the common ancestor of all sauropod dinosaurs. At the moment, it is very difficult to tell the difference between a true early sauropod and a sauropodomorph very close to the common ancestor of sauropods. Given the data we have for Pulanesaura, we find it most likely to be a very early sauropod. Certainly, future studies and perhaps more material of Pulanesaura will clarify this picture.

How big was Pulanesaura? We certainly don’t have a complete skeleton of this herbivore, but we have enough bones from enough areas of the body to infer that this animal stretched nearly 8 meters (about 26 feet) long and stood about 2 meters (about 6.5 feet) high at the hip. That may seem big, but it’s small for a sauropod.

Why is Pulanesaura significant? The traditional picture of sauropodomorph evolution is that when true sauropods came onto the scene, the other sauropodomorphs were pushed aside, their small body size and “inferior” anatomy undone by the larger herbivores. But Pulanesaurua turns this notion on its head because, living alongside it at Spion Kop were other sauropodomorph dinosaurs with very different anatomies. Adam, Johann, myself, and others have described two of these other sauropodomorphs, both also from Spion Kop. One, Aardonyx, was a 7 meter long sauropodomorph capable of assuming both a bipedal and quadrupedal posture; and another, Arcusaurus, was a small, juvenile sauropodomorph with a hold-over of more primitive features. And one of the things these other sauropodomorphs had going for them was that they could feed at different heights and use their forelimbs to direct foliage to the mouth. In contrast, the anatomy of Pulanesaura shows that it was an obligate quadruped (it could not stand bipedally on its hind legs), which would have restricted its vertical reach for vegetation compared with these other sauropodomorphs. However, the single neck (cervical) vertebra we have for Pulanesaura has joints that were spaced and angled (much like those of other sauropods) such that they would have allowed for a larger range of neck motion than in other contemporaneous sauropodomorphs. In other words, although Pulanesaura could not rear up and extend its neck into the trees, it could stand still and more efficiently crop foliage over a wider range. We suggest Pulanesaura shows us the incipient stages of what sauropods became very good at: they stood in one place and swept their tiny heads across a sea of vegetation. As the Jurassic period wore on, and vegetation became larger and more widespread, the advantages conferred by a body which conserved energy by standing still and sweeping a long neck across swaths of plants would ultimately select for sauropods and not their bipedal cousins.

It would have been difficult to explain to my five-year-old self that it would be many lunch breaks from the initial discoveries at Spion Kop to their final reveal to the public. But it has been worth the wait. I consider myself to be very fortunate to have the privilege of working with so many enthusiastic and talented people. Moreover, it is important to stress that cooperation with the farmers at Spion Kop was invaluable. Partnerships with farmers are a great benefit to paleontology in South Africa. Farmers know their land well, and they’re always spotting interesting things. It’s such a pleasure to work with people who value their heritage and to help them learn more about it. Because of such mutual respect and interest in South Africa’s prehistory, we now have a much richer picture and appreciation of a pivotal moment in sauropod dinosaur history that would not otherwise be possible.

And my inner five-year-old most certainly approves!

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Dinosaur hand and forelimb posture might have been more diverse than previously hypothesized

Turn a doorknob and you are taking advantage of what anatomists call pronation and supination: the ability to rotate your hand palm-side down (pronation) or palm-side up (supination).  This ability stems from your bone geometry: the radius bone in your forearm is curved can pivot around your ulna, rotating your hand in the process.  Drop to the floor and crawl, and your hand is pronated by crossing the radius over the ulna just as it is for mammals which walk on all-fours like elephants, dogs, and cats.

Pronation and supination of the hand by rotating the radius bone over the ulna in humans. (c) 2013 M.F. Bonnan.

Pronation and supination of the hand by rotating the radius bone over the ulna in humans. (c) 2013 M.F. Bonnan.

In our paper published this week in PLOS ONE, my former student, Collin VanBuren (now a Ph.D. fellow at the University of Cambridge, UK) and myself suggest that most dinosaurs could not actively pronate their hands (that is, turn doorknobs) because their radius could not cross their ulna. Our conclusions were reached after analyzing the bones of nearly 300 specimens representing living birds, reptiles, mammals, and dinosaurs like Tyrannosaurus, Apatosaurus, and Triceratops.

Difference in radius bone geometry are correlated to some degree with forelimb posture.

Difference in radius bone geometry are correlated to some degree with forelimb posture.

Statistical analysis of radius geometry shows that dinosaurs most often have a straight radius bone with a non-circular head (the part that allows movement at the elbow), a shape similar to those of lizards, crocodiles, and birds.  These animals cannot actively pronate their hands, and in lizards and crocodiles this radius geometry is correlated with a non-erect forelimb posture.  In contrast, most land mammals show a curved radius geometry that enables the forelimb to be held erect and the hand to be pronated.  Mammals like ourselves have a well-rounded radial head that allows the radius to actively swivel around the ulna.  Tellingly, the only mammals in our sample that resembled reptiles, birds, and dinosaurs were the primitive, sprawling egg-laying duck-billed platypus and spiny echidna.

Our findings are significant in that they show dinosaur forelimb posture was not mammal-like and, possibly most importantly, more diverse than previously appreciated.  For example, radius shape suggests the forelimb posture and range of pronation in horned dinosaurs like Triceratops was more like those of a crocodile than a rhino.  In another example, the radius geometry of the giant, long-necked sauropods such as Apatosaurus don’t comfortably group with living reptiles, birds, or mammals, suggesting that their forelimb postures were achieved in anatomically novel ways.  Ultimately, our data strongly suggest that we must re-evaluate our conceptions of how dinosaurs could and could not use their forelimbs.

We can also breathe a sigh of relief: most predatory dinosaurs could not open our doors.

I  must give a big shout out and expression of gratitude to Collin — his dedication to this project, through several starts and stops, is what finally saw it through.  That we landed this research in a venue like PLOS ONE is that much more of a testament to his perseverance to get this science out there.  It means a lot to me that we got this out and into open-access: this represents the accumulation of some of my inferences and hypotheses on dinosaur forelimb posture since my graduate school days.  I also want to acknowledge the influence and inspiration of some fellow dinosaur forelimb fanatics, namely Ray Wilhite, Phil Senter and Heinrich Mallison.  All are colleagues and friends, and all have also in their own unique ways put dinosaur forepaws front and center — I encourage you to check out their research!

Read our paper, which is open access: http://dx.plos.org/10.1371/journal.pone.0074842

Let’s face it: birds are dinosaurs -Part 3-

In the last two posts, I outlined many of the reasons why birds and dinosaurs have been “estranged” and are now being reunited as members of the same clade: Dinosauria.  If you haven’t read these first two posts, check them out:

So, at this point if you’re still not convinced that birds are indeed the living dinosaurs among us, here is one more thing to consider.  Let me take you by the hand …

Embryologists who have studied the development of bird embryos for decades have always come away from studies of their hands with the following conclusion: five initial digits form in cartilage (technically called anlagen), but after awhile, only the three middle digits remain.  Technically, we number digits from the thumb out to the little finger.  So, your thumb would be digit I and your little finger would be digit V.  In birds, the three remaining digits that fuse into the hand are II, III, and IV.  Okay, great, so what?

So this: the earliest predatory dinosaurs had five digits, but the main three digits were I, II, and III, not II, III, and IV.  In fact, during predatory dinosaur evolution, digits IV and V decrease in size until all that is left are I, II, and III.  This contradiction between the digit identities of bird hands and predatory dinosaur hands has been held up as the ultimate “proof” that all the amazing similarities between birds and dinosaurs are just that: amazing convergence.

Enter the past two decades of embryonic science, studies of evo-devo (evolutionary development), and a proliferation of studies combining old-school developmental anatomy with new-school gene studies.  It turns out that the digit identities in the hand are not set like permanent blueprints, but develop from the expression of various developmental genes to concentrations of various proteins.  Without going into great detail, we now know that the identity that digits assume (that is, whether they become I or V or something else) depends on how much of a concentration of particular proteins these regions of the hand were exposed to during development.  Simply put, higher concentrations of certain proteins trigger genes that, when transcribed and translated (i.e., expressed), ultimately create proteins that form digit I, II, III, IV, or V.

Intriguingly, this means that the relative position of a digit in the embryo’s hand and what that digit actually becomes are different.  In other words, a digit in position II could become a digit I if the concentration of various proteins and the expression of certain genes are changed.  This has been called the Frame-shift Hypothesis.  In this case, the “frame” is the region of gene expression that gives digits their identities, whereas the how this gradient moves in the developing hand is the “shift.”  What this all means is that just because you develop a digit in your hand where digit II should be doesn’t at all guarantee that it will become digit II.  It might become digit I, for example, depending on the frameshift.

What this all means is that, hypothetically, at some point during predatory dinosaur evolution, the anlagens that were in positions II, III, and IV frame-shfited to I, II, and III.  This frameshift would, of course, “solve” the digital confusion between birds and dinosaurs, but of course this hypothesis has been questioned and there was no fossil evidence of it occurring in dinosaurs … until recently.

A new Jurassic ceratosaur (a primitive type of predatory dinosaur) from China called Limusaurus preserved a complete hand that looks like an embryonic bird hand!  See for yourself: Figure 2 in their paper.  Now, compare that figure of the ceratosaur hand back to the ostrich hand.  I find this absolutely fascinating and was floored to see a dinosaur hand that looked like something undergoing the hypothesized frameshift.  Here, captured in stone for millions of years, is what you would predict to see in a transitional form going from the primitive predatory dinosaur digit arrangement to the birdy one.  Note in the Limusaurus hand figure that where the first digit is is a splint, like in a bird embryo, and next to that, the digit in the typical place of digit II, is something that looks an awful lot like digit I.

So, to conclude my thread, let me say that it is not at all parsimonious at this point in time to separate birds from dinosaurs.  That is equivalent to separating you from mammals.  It is no longer enough to argue that all the similarities between dinosaurs and birds are due strictly to an amazing amount of convergent evolution.  We have unique skeletal features only birds and dinosaurs share, we have dinosaurs that could not possibly fly possessing feathers, and we even have fossil support to explain why bird and dinosaur hands match up after all.

And finally back to the recent paper that inspired this thread in the first place: Birds have paedomorphic dinosaur skulls.  Paedomorphosis is the retention of juvenilized features into adulthood.  In other words, the proportions of the larva, infant, or juvenile remain relatively unaltered as adults.  This occurs a lot more often in nature than you may realize.  Essentially, the scientists Bhullar and colleagues used a shape analysis technique I have used myself: geometric morphometrics.  This technique analyzes changes in bony landmarks across numerous specimens and provides a mathematical test to see whether the changes predicted are actually significant.  What Bhullar and colleagues discovered was that bird skulls grow as if they were juvenilized dinosaur skulls!  Yet another nail in the coffin (scientifically) for the vague claim that birds cannot be dinosaurs.

Let’s face it: birds are dinosaurs.  I emphasize that I say this in the scientific sense of “certainty.”  Although we can’t be 100% certain in science, these data show overwhelmingly that birds are part of the dinosaur family tree.  When you realize that there are over 10,000 species of living birds but only 4600 or so species of living mammals, you realize it is still the Age of Dinosaurs after all.